Start by creating a composite image using the four obtained images from each mouse. Utilize a graphics editor to align all the blood vessels, employ the optic nerve head and blood vessel patterns as landmarks for aligning the composite fiber gram overlap the composite images and the confocal images of the same retina stained with ICAM2, to achieve in vivo and ex vivo alignment. The composite vis-oct fiber gram is compared with the corresponding confocal image of flat mounted retina.
Immuno stain with TUJ1 for RGC axons. Blood vessels exhibit distinguishable branching structures which can be matched with the ICAM2 labeled blood vessels on the confocal image. Side-by-side comparison between ex vivo confocal microscopy and in vivo vis-oct revealed identical RGC Axon bundle networks and surrounding retinal vasculature.
