This work was supported by National Institutes of Health grants HL44485 and HL28607.

Ethics Statement: All procedures were reviewed and approved by the Institutional Animal Care and Use Committee.
1. Preliminary Fabrication of Micropipettes, Restrainers, and Blockers
<ol>
	<li>Pull several clean borosilicate glass capillary tubes in half using an electronic puller adjusted so that, when pulled, the stretched portion of the tube is about 1 cm in length and the two halves are somewhat symmetric. Ensure that the taper is consistent with the dimensions in Figure 1. Use both halves for micropipettes, restrainers and blockers.
	<ol>
		<li>Bevel the micropipettes using an air driven grinding wheel30 with 0.5 &#181;m abrasive paper bathed with water. Set the angle of the micropipette holder so that it is about 30 degrees from horizontal.</li>
		<li>Thoroughly wash and dry the micropipettes by using suction to pull clean acetone through the tip and up the shaft. Inspect the micropipettes (Figure 1A) using a small upright microscope with 4&#215; and 40&#215; objectives fitted with an alligator clip micropipette holder and an eyepiece reticle.</li>
		<li>Select micropipettes with tip opening about 50 &#181;m long with a bevel whose length/width ratio is between 3.1 and 3.5 and with a sharply tapered point which helps penetrate the tough collagen fibers in the mesentery.</li>
		<li>Store 15-20 micropipettes of slightly varying sizes in a dust-free box.</li>
	</ol>
	</li>
	<li>Make restrainers using pulled capillary tubes prepared in step 1.1). Hold a pulled glass capillary tube briefly near a microflame to form a blunt end (Figure 1B). Store several in a dust-free box.</li>
	<li>Make microoccluders using pulled capillary tubes prepared in step 1.1). Hold a pulled capillary tube under a microflame and gently bend (using a tubing adapter, e.g., 23G) the fine tip (about 4 mm from tip) to make an angle of close to 120 degrees to the shaft (Figure 1C). Make and store several.</li>
</ol>
2. Animal Preparation and Surgery
<ol>
	<li>Anesthetize male (350-450 g) or female Sprague-Dawley rats (200-300 g) with pentobarbital sodium (80-100 mg/kg, Sigma-Aldrich, P3761) via subcutaneous injection; protect the mesentery by not using intraperitoneal injection.</li>
	<li>Throughout surgical procedures and experimental protocols, maintain anesthesia by supplemental injections (30 mg/kg) as needed. Determine depth of anesthesia by toe pinch or corneal reflex. After completion of the experimental procedure, euthanize the rat via pentobarbital overdose or intra-cardiac injection of saturated potassium chloride under anesthesia.</li>
</ol>
3. Prepare Solutions and Erythrocytes for use as Flow Markers
<ol>
	<li>Prepare mammalian Ringer&#39;s solution for superfusate and control perfusate solution (typically mammalian Ringer&#39;s solution&#160;containing 10 mg/ml fatty acid free bovine serum albumin, BSA).
	<ol>
		<li>Filter perfusate through 0.2 &#181;m syringe filters to remove tiny particles that might block the micropipette tip; filter into small clean container.</li>
	</ol>
	</li>
	<li>Prepare erythrocytes by drawing about 0.2 ml blood from the tail vein of the anesthetized rat into a 20G needle on a small syringe containing 0.05 ml heparin (1,000 U/ml) and transfer to a 15 ml centrifuge tube containing about 14 mL mammalian Ringer&#39;s solution&#160;solution.
	<ol>
		<li>Centrifuge to gently pack red cells (about max 200 &#215; g for 7 min). Draw off the supernatant and re-suspend the red cells in Ringer&#39;s solution.</li>
		<li>After centrifuging and removing supernatant three times leave the packed red cells in the bottom of the tube for later use. Note that this procedure reduces platelets in the final perfusates to less than 0.1% of normal levels31.</li>
	</ol>
	</li>
</ol>
4. Arrange the Tissue on the Animal Tray
<ol>
	<li>Shave the abdomen of the anesthetized rat from below navel to xiphoid process. Ensure that the shaved area extends around the right side (for rat placed on right side) so that hair does not form a wick to draw the superfusate out of the tissue well. Remove cut hairs with a wetted gauze pad or tissue.
	<ol>
		<li>Hold the skin with a blunt serrated forceps and make a center-line incision (2-3 cm long) through the skin using a sturdy scissors. Using a fine (iris) scissors make a similar incision through the linea alba, lifting the abdominal wall with serrated forceps to avoid damaging the gut.</li>
		<li>With the animal on its side on the animal tray, gently pull out the gut from the abdominal cavity using cotton-tipped applicators (wood stick) soaked in Ringer&#39;s solution and blunt serrated forceps. Arrange the gut in the tissue well so that the mesentery is draped over the pillar for viewing through the microscope taking care to avoid touching the mesentery (potentially damaging microvessels) with either forceps or cotton. 
		Note: The animal tray (Figure 2A) can be constructed from Plexiglas and requires a tissue well (about 3 mm deep), an optically clear pillar (e.g., polished quartz about 2 cm dia. and 5 mm high), and a warming pad adjusted to maintain the animal&#8217;s temperature. The thickness of the pillar must not exceed the working distance of the objective.</li>
	</ol>
	</li>
	<li>Position the animal tray on the microscope stage so that the mesentery is visible through the eyepieces.</li>
	<li>Position a gravity-fed drip line to continuously superfuse the mesentery with mammalian Ringer&#39;s solution maintained at 35&#8211;37 &#176;C. Use gauze pads to hold the gut in place, help retain moisture, and wick excess Ringer&#39;s solution&#160;off the surface. Adjust the flow and aspirate the effluent to maintain a consistent superfusate thickness.</li>
	<li>Identify target venular microvessels, which are unbranched segments downstream of convergent flow, one or two branches distal to true capillaries. Find an unbranched vessel (ideally, 600 to 1,000 &#181;m in length) having brisk blood flow and free of white cells sticking on the vessel wall.</li>
	<li>Position the test microvessel in the center of the microscope field and move the restrainer into position near the chosen cannulation site.</li>
</ol>
5. Fill Micropipette and Mount in Holder
<ol>
	<li>Just before cannulating, suspend the red cells in the perfusate. Add 7 &#181;l of packed red cells to 0.5 ml perfusate in a clean borosilicate test tube. Note: Hematocrits of 1-3% can be used, but consistent hematocrit will lead to consistent perfusate concentrations of any substances released from the red cells.</li>
	<li>Fit a 1 ml syringe with a 23G tubing adapter and PE 50 tubing (5-15 cm length). Draw the perfusate/red cell mixture into the syringe. Invert syringe to mix and expel all bubbles from tubing and adapter. For increased efficiency, fit tubing to several syringes before the experiment starts and keep them in a dust free box or plastic bag.</li>
	<li>Fill the micropipette by advancing the tubing into the large end of the micropipette until it abuts the tapered region. Apply a gentle quick push on the syringe plunger to fill the micropipette tip. Note: A tiny stream or droplet should be visible at the tip to evidence complete filling.</li>
	<li>Withdraw the tubing while gently pushing on the plunger to fill the wider part of the micropipette shaft. Remove small bubbles in the wide shaft by carefully flicking the micropipette shaft. Note: A similar procedure has been illustrated32.</li>
	<li>Place the micropipette into a pipette holder with a side port which allows a continuous fluid connection to a water manometer. Ensure that the holder, which is attached to a hydraulic drive used to control very fine advancement of the micropipette, is at a slight angle (15-25&#176;) to the horizontal so that the edge of the micropipette taper does not hit the gut or tray.</li>
	<li>Mount the hydraulic drive on a moveable micromanipulator, which has x, y, and z drives to enable close alignment to the test vessel (Figure 2).</li>
	<li>Adjust the hydrostatic pressure applied to the fluid in the micropipette using a syringe or water-filled rubber bulb to change the height of fluid in the water column of the manometer to about 40 cmH2O above the mesentery.</li>
	<li>Cannulate the microvessel as soon as possible after filling the pipette; red cells settle to the bottom of the pipette, so that after about 40 min very few red cells will flow into the vessel.</li>
</ol>
6. Microcannulation and Microvascular Pressure Measurement
<ol>
	<li>Before positioning the filled micropipette under the microscope, gently press the restrainer onto the tissue near the microvessel applying sufficient force to grip the tissue. Draw the restrainer back, slightly stretching the tissue in line with the microvessel so that the stresses in the mesenteric collagen fibers are aligned with the vessel.
	<ol>
		<li>Align the micropipette with the vessel and lower it into view through the eyepieces. Place the tip just upstream of the chosen cannulation site and lower it onto the tissue so that it partially obstructs flow within the vessel, but does not occlude it.</li>
	</ol>
	</li>
	<li>Cannulate the vessel by driving the pipette tip slowly into the vessel lumen using the hydraulic drive. Be careful not to push through the lower side of the vessel. 
	Note: As the micropipette enters the lumen, the perfusate rapidly washes the blood in the vessel out of the lumen and perfusate freely flows into the animal&#8217;s circulation distal to the test microvessel, displacing some of the normal blood perfusion in the downstream vessels.</li>
	<li>Lower the perfusion pressure by adjusting the manometer until the blood (as indicated by the animal&#8217;s red cells) is drawn back into the perfused segment; this determines the balance pressure where the red cells gently oscillate in the vessel lumen and measures the hydrostatic microvessel pressure (Pc) at the distal end of the microvessel segment. Maintain vessel perfusion at all pressures above this balance pressure.</li>
</ol>
7. Microocclusion and Collection of Data
<ol>
	<li>Optional step: Before using the micro-occluder to block the vessel, press it into the tissue in a non-used area of mesentery far from any vessel so that the tip accumulates a fine pad of tissue that protects the experimental vessel during repeated micro-occlusions.</li>
	<li>Place the blocker above the perfused vessel near the lower edge of the microscope field.</li>
	<li>Record the following with video and audio.
	<ol>
		<li>Verbally record the location of the block site and the lower screen edge as seen on the eyepiece reticle.</li>
		<li>With the tip of the blocker placed just above the microvessel, use the fine z control of the micromanipulator to gently lower the blocker until the flow in the vessel is occluded. Note the manometer pressure (Pc) on audio. Apply occlusion typically for 3-10 sec, and then release, restoring free perfusion. Move the block site up the vessel toward the pipette tip in 5-10 &#181;m steps based on time (&#62;5 min after initial block at a site), number of occlusions (3-5), to prevent vessel wall damage at the block site.</li>
	</ol>
	</li>
</ol>
8. Analysis of Data and Measurement of Lp (Water Permeability)
<ol>
	<li>During video playback, determine the initial distance (&#8467;0) from a marker red cell to the occlusion site by use of an image of a stage micrometer and the known positions on the images. Determine the initial velocity (d&#8467;/dt) of the marker cell from its position in several frames during the 3-10 sec of recorded images. Determine the vessel radius (r) from the images taken during occlusion (Figure 3).</li>
	<li>Calculate Jv/S for each occlusion as (d&#8467;/dt)&#215;(1/&#8467;0)&#215; (r/2). Calculate Lp at a constant pressure as (Jv/S) divided by the driving pressure (microvessel pressure &#8211; effective colloid osmotic pressure; see Discussion).</li>
</ol>

The authors have nothing to disclose.

Details of Lp calculations. Although transvascular fluid movement occurs while the vessel is freely perfused, such exchange is far too small to be measured during free perfusion because it is typically less than 0.01% of the vessel perfusion rate. However, when perfusion is transiently stopped by occluding the microvessel, transvascular flow (i.e., filtration) is measured from the movement of marker red cells in the lumen as the column of fluid between a marker red cell and ...

Microperfusion in the vasculature entails establishing controlled flow of an artificial perfusate of known composition via a micropipette in a blood vessel usually less than 40 &#181;m in diameter. The perfused vessel remains within its normal tissue environment and is perfused with the animal&#8217;s blood up to the time of cannulation. When used in conjunction with a range of video imaging or fluorometric techniques, in situ microperfusion enables measurement of water and solute flows across the walls of microvessels under conditions where the driving forces for these flows are known and the permeability properties of the vascular wall can be directly evaluated. Further, by controlling the composition of the fluid surrounding the microvessel in the tissue (perfusate and superfusate), the regulation of microvessel permeability and exchange can be investigated by enabling the endothelial cells forming the microvessel wall to be exposed to a variety of experimental conditions (agonists, modified perfusion conditions, fluorescent indicators to measure intracellular composition and signaling) for precisely measured periods of time (sec to hr). In addition, ultrastructural or cytochemical evaluations of key cellular molecular structures regulating the barrier can be investigated in the same microvessels in which permeability is directly measured. The approach thereby forms a bridge between investigation of the cellular and molecular mechanisms to modify endothelial barrier function in cultured endothelial cell monolayers and investigation in intact microvessels. See the following reviews for further evaluation1-6.
A limitation of microperfusion is that it can be used only in microvascular beds that are thin, transparent and have sufficient structural integrity to enable cannulation with a glass micropipette. While early investigations used frog microvessels in mesentery and thin cutaneous pectoris muscle7,8, by far the most commonly used preparation in mammalian models is the rat mesentery9-15. Most investigations have focused on acute changes in vascular permeability studied over periods of 1-4 hr, but more recent investigations have been extended to measurements on individual vessels 24-72 hr after an initial perfusion12,16. The recently developed CRISPR technology, which promises to make more genetically modified rat models available for studying vascular permeability regulation17 should enable the methods described in this communication to be applied in venular microvessels of the mesentery in these important new rat models.
The method requires an inverted microscope equipped with a custom built microscope stage large enough to hold both the animal preparation and at least three micromanipulators used to position microtools close to the perfused vessel and to align a perfusion micropipette with the vessel lumen. For example a custom platform for an x-y microscope stage (about 90 &#215; 60 cm) can be fabricated from a 1 cm thick steel plate with a rust-proof coating. The stage is attached to an engineering index table or two dove-tail slides mounted at right angles and supported on Teflon pillars or ball transfers for movement in the horizontal plane. A typical rig (see Figure 2) has much in common with the microscope and micropositioning equipment used for a range of intravital microcirculation experiments such as those to measure single vessel blood flow and hematocrit, local oxygen delivery by blood perfused microvessels, regulation of vascular smooth muscle tone, and the local microvascular accumulation of fluorescent tracers injected into the whole circulation.18-26
The fundamental aspect of the technique is the measurement of volume flow (Jv) across a defined surface area (S) of the microvessel wall. To accomplish this via the modified Landis technique described herein a simple inverted microscope is adequate. A small video camera is mounted on the image port and the video signal, with an added time base, is displayed on a video monitor and recorded either in digital form on a computer or as a digital or analog signal on a video recorder. Once the microvessel is cannulated the portion of the microvessel visible to the camera can be changed by moving the stage and manipulators as a unit without disrupting the cannulation.
Measurement of transvascular flows may also be combined with more detailed investigations using a sophisticated fluorescence microscope with appropriate filters such as rigs used for measurements of solute permeability, fluorescent ratio monitoring of cytoplasmic calcium or other cellular mechanisms, and confocal imaging 6,12,13,27. A key advantage of all microperfusion approaches is the ability to make repeated measures, on the same vessel, under controlled change of driving force such as hydrostatic and oncotic pressures, or induced change in vessel responses to inflammatory conditions. The most common design is a paired comparison of measured hydraulic conductivity (Lp) on the same vessel with the vessel first perfused via a micropipette filled with a control perfusate and the red cell suspension to establish a baseline permeability state, then with a second pipette with the test agent added to the perfusate. Multiple cannulations are possible with the cycle repeated after reperfusion with the control pipette.
The present protocol demonstrates the cannulation and microperfusion of a venular vessel in rat mesentery to record water fluxes across the microvessel wall and measure the Lp of the vessel wall, a useful index of the permeability of the common pathway for water and solutes across the intact endothelial barrier. The procedure is called the modified Landis technique because the original Landis principle of using the relative movement of red cells as a measure of transvascular fluid exchange after perfusion is blocked is preserved28, but the range of experimental conditions (e.g., the hydrostatic and albumin oncotic pressure differences across the microvessel wall) available after microperfusion is far greater than in uncannulated blood perfused microvessels8,29.

<table border="0" cellpadding="0" cellspacing="0">
	<tbody>
		<tr>
			<td>MICROSCOPE, TABLE AND STAGE</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>inverted microscope (metallurgical type) with trinocular head for video: example</td>
			<td>Olympus</td>
			<td>CK-40</td>
			<td>try to place eyepieces higher relative to stage--you have to look through eyepieces while reaching around to top of stage over intervening micromanipulators</td>
		</tr>
		<tr>
			<td>inverted microscope (metallurgical type) with trinocular head for video: example</td>
			<td>Leica</td>
			<td>DMIL</td>
			<td>try to place eyepieces higher relative to stage--you have to look through eyepieces while reaching around to top of stage over intervening micromanipulators</td>
		</tr>
		<tr>
			<td>narrow diameter, long working distance objective: example</td>
			<td>Nikon</td>
			<td>Nikon E Plan 10&#215;/0.25 LWD</td>
			<td></td>
		</tr>
		<tr>
			<td>stage platform--1/2 inch or 1 cm sheet steel</td>
			<td>welding shop</td>
			<td></td>
			<td>this should be heavy to reduce vibration</td>
		</tr>
		<tr>
			<td>Unislide x-y table: dove tail slides</td>
			<td>Velmex</td>
			<td>AXY4006W1</td>
			<td></td>
		</tr>
		<tr>
			<td></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>VIDEO</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>CCD video camera: example</td>
			<td>Pulnix</td>
			<td>TM-7CN (no longer available)</td>
			<td>no color needed</td>
		</tr>
		<tr>
			<td>video capture system with audio--generic</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>video playback system (completely still frame, single frame motion)</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>small microphone</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>MICROMANIPULATORS, HOLDERS</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>micromanipulator, XYZ (3)</td>
			<td>Prior/Stoelting (no longer available)</td>
			<td></td>
			<td>look for fine Z, and larger range of travel in coarse drives for ease of positioning</td>
		</tr>
		<tr>
			<td>hydraulic probe drive, one way</td>
			<td>FHC</td>
			<td>50-12-1C</td>
			<td>need to buy either manual drive or electronic drive</td>
		</tr>
		<tr>
			<td>manual drum drive&#160;</td>
			<td>FHC</td>
			<td>50-12-9-02</td>
			<td></td>
		</tr>
		<tr>
			<td>or hydraulic drive, 3 way</td>
			<td>Siskiyou Corporation</td>
			<td>MX610 (1-way) or MX630 (3-way)</td>
			<td>great for short arms, water filled and must be sent back for refill ~every 2 years</td>
		</tr>
		<tr>
			<td>connectors/rods/holders</td>
			<td>Siskiyou Corporation</td>
			<td>MXC-2.5, MXB etc.</td>
			<td></td>
		</tr>
		<tr>
			<td>pin vise</td>
			<td>Starrett</td>
			<td>162C</td>
			<td>to hold restrainer</td>
		</tr>
		<tr>
			<td>pipette holder</td>
			<td>World Prescision Instruments</td>
			<td>MPH3</td>
			<td></td>
		</tr>
		<tr>
			<td>water manometer ~120 cm</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>MICROSCOPE TRAY</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>clear Plexiglas for microscope tray for animal</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>3/4 inch polished quartz disc ~1/4 inch tall</td>
			<td>Quartz Scientific Inc.</td>
			<td>custom</td>
			<td>&#160;(or polished plexiglass, glass); make sure the height is less than working distance of objective</td>
		</tr>
		<tr>
			<td>Plexiglas glue (Weld-on 4: CAUTION CARCINOGEN)</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>medical adhesive for tissue well</td>
			<td>NuSil</td>
			<td>MED-1037</td>
			<td></td>
		</tr>
		<tr>
			<td>All-purpose silicone rubber heat mat, 5&#34; L x 2&#34; W</td>
			<td>Cole Parmer</td>
			<td>EW-03125-20</td>
			<td>heater for microscope tray--needs cord and controller--240V version available</td>
		</tr>
		<tr>
			<td>Power Cord Adapter for Kapton Heaters and Kits, 6 ft, 120 VAC</td>
			<td>Cole Parmer</td>
			<td>EW-03122-75</td>
			<td></td>
		</tr>
		<tr>
			<td>STACO 3PN1010B Variable-Voltage Controller, 10 A; 120 V In, 0-140 V Out</td>
			<td>Cole Parmer</td>
			<td>EW-01575-00</td>
			<td></td>
		</tr>
		<tr>
			<td></td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>PIPET MANUFACTURE</td>
			<td></td>
			<td></td>
			<td></td>
		</tr>
		<tr>
			<td>vertical pipette puller</td>
			<td>Sutter Instrument Company</td>
			<td>P-30 with nichrome filament</td>
			<td></td>
		</tr>
		<tr>
			<td>1.5 mm OD thin wall capillary tubing</td>
			<td>Sutter Instrument Company</td>
			<td>B150-110-10</td>
			<td></td>
		</tr>
		<tr>
			<td>pipette grinder air stone and dissection microscope--see reference in text</td>
			<td></td>
			<td></td>
			<td>or purchase a package from Sutter Instruments or World Precision Instruments</td>
		</tr>
		<tr>
			<td>RX Honing Machine, System II</td>
			<td>RX Honing Machine Corporation</td>
			<td>MAC-10700 Rx System II Machine</td>
			<td>alternative for air stone, use with a dissecting microscope mounted at an angle</td>
		</tr>
		<tr>
			<td>&#160;&#160; with ceramic sharpening disc</td>
			<td>RX Honing Machine Corporation</td>
			<td></td>
			<td>use &#34;as is&#34; or attach lapping film</td>
		</tr>
		<tr>
			<td>lapping film sheets, 0.3 or 0.5 um</td>
			<td>3M</td>
			<td>part no. 051144 80827</td>
			<td>268X Imperial lapping film sheets with adhesive back--can be purchased from Amazon</td>
		</tr>
	</tbody>
</table>

microperfusion technique to investigate regulation of microvessel permeability in rat mesentery

Experiments to measure the permeability properties of individually perfused microvessels provide a bridge between investigation of molecular and cellular mechanisms regulating vascular permeability in cultured endothelial cell monolayers and the functional exchange properties of whole microvascular beds. A method to cannulate and perfuse venular microvessels of rat mesentery and measure the hydraulic conductivity of the microvessel wall is described. The main equipment needed includes an intravital microscope with a large modified stage that supports micromanipulators to position three different microtools: (1) a beveled glass micropipette to cannulate and perfuse the microvessel; (2) a glass micro-occluder to transiently block perfusion and enable measurement of transvascular water flow movement at a measured hydrostatic pressure, and (3) a blunt glass rod to stabilize the mesenteric tissue at the site of cannulation. The modified Landis micro-occlusion technique uses red cells suspended in the artificial perfusate as markers of transvascular fluid movement, and also enables repeated measurements of these flows as experimental conditions are changed and hydrostatic and colloid osmotic pressure difference across the microvessels are carefully controlled. Measurements of hydraulic conductivity first using a control perfusate, then after re-cannulation of the same microvessel with the test perfusates enable paired comparisons of the microvessel response under these well-controlled conditions. Attempts to extend the method to microvessels in the mesentery of mice with genetic modifications expected to modify vascular permeability were severely limited because of the absence of long straight and unbranched microvessels in the mouse mesentery, but the recent availability of the rats with similar genetic modifications using the CRISPR/Cas9 technology is expected to open new areas of investigation where the methods described herein can be applied.

Figure 4 shows the results from measuring the time course of changes in Lp in a rat venular microvessel cannulated successively with four perfusates.33 The magnitude of Lp calculated at a constant pressure was used as a measure of changes in microvessel wall permeability, first in the control state with a perfusate containing 1% bovine serum albumin then when the vessel was exposed to the inflammatory agent bradykinin (Bk) using a second micropipette containing 10 nM Bk. ...

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Microperfusion Technique to Investigate Regulation of Microvessel Permeability in Rat Mesentery

The modified Landis technique enables paired measurement of the hydraulic conductivity of individual microvessels in the mesentery of normal and genetically modified rats under control and test conditions using microperfusion techniques. It provides a convenient method to evaluate mechanisms that regulate microvessel permeability and transvascular exchange under physiological conditions.

Experiments to measure the permeability properties of individually perfused microvessels provide a bridge between investigation of molecular and cellular ...

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9.7K Views.  University of California Davis. The modified Landis technique enables paired measurement of the hydraulic conductivity of individual microvessels in the mesentery of normal and genetically modified rats under control and test conditions using microperfusion techniques. It provides a convenient method to evaluate mechanisms that regulate microvessel permeability and transvascular exchange under physiological conditions. 

Video: Microperfusion Technique to Investigate Regulation of Microvessel Permeability in Rat Mesentery

Preparation of 2-dGuo-Treated Thymus Organ Cultures

In the thymus, interactions between developing T-cell precursors and stromal cells that include cortical and medullary epithelial cells are known to play a key role in the development of a functionally competent T-cell pool. However, the complexity of T-cell development in the thymus in vivo can limit analysis of individual cellular components and particular stages of development. In vitro culture systems provide a readily accessible means to study multiple complex cellular processes. Thymus organ culture systems represent a widely used approach to study intrathymic development of T-cells under defined conditions in vitro. Here we describe a system in which mouse embryonic thymus lobes can be depleted of endogenous haemopoeitic elements by prior organ culture in 2-deoxyguanosine, a compound that is selectively toxic to haemopoeitic cells. As well as providing a readily accessible source of thymic stromal cells to investigate the role of thymic microenvironments in the development and selection of T-cells, this technique also underpins further experimental approaches that include the reconstitution of alymphoid thymus lobes in vitro with defined haemopoietic elements, the transplantation of alymphoid thymuses into recipient mice, and the formation of reaggregate thymus organ cultures. (This article is based on work first reported Methods in Molecular Biology 2007, Vol. 380 pages 185-196).

This video demonstrates the dissection and removal of the fetal thymus as well the preparation of ex vivo cultures of 2-dGuo-treated thymus.

In the thymus, interactions between developing T-cell precursors and stromal cells that include cortical and medullary epithelial cells are known to play ...

In vitro Reconstitution of the Active T. castaneum Telomerase

Efforts to isolate the catalytic subunit of telomerase, TERT, in sufficient quantities for structural studies, have been met with limited success for more than a decade. Here, we present methods for the isolation of the recombinant Tribolium castaneum TERT (TcTERT) and the reconstitution of the active T. castaneum telomerase ribonucleoprotein (RNP) complex in vitro.
Telomerase is a specialized reverse transcriptase1 that adds short DNA repeats, called telomeres, to the 3' end of linear chromosomes2 that serve to protect them from end-to-end fusion and degradation. Following DNA replication, a short segment is lost at the end of the chromosome3 and without telomerase, cells continue dividing until eventually reaching their Hayflick Limit4. Additionally, telomerase is dormant in most somatic cells5 in adults, but is active in cancer cells6 where it promotes cell immortality7.
The minimal telomerase enzyme consists of two core components: the protein subunit (TERT), which comprises the catalytic subunit of the enzyme and an integral RNA component (TER), which contains the template TERT uses to synthesize telomeres8,9. Prior to 2008, only structures for individual telomerase domains had been solved10,11. A major breakthrough in this field came from the determination of the crystal structure of the active12, catalytic subunit of T. castaneum telomerase, TcTERT1.
Here, we present methods for producing large quantities of the active, soluble TcTERT for structural and biochemical studies, and the reconstitution of the telomerase RNP complex in vitro for telomerase activity assays. An overview of the experimental methods used is shown in Figure 1.

In vitro Reconstitution of the Active T. castaneum Telomerase

Efforts to isolate the catalytic subunit of telomerase, TERT, in sufficient quantities for structural studies, have been met with limited success for more than a decade. Here, we present methods for the isolation of the recombinant Tribolium castaneum TERT (TcTERT) and the reconstitution of the active T. castaneum telomerase ribonucleoprotein (RNP) complex in vitro.

Efforts to isolate the catalytic subunit of telomerase, TERT, in sufficient quantities for structural studies, have been met with limited success for more ...

Rat Mesentery Angiogenesis Assay

The adult rat mesentery window angiogenesis assay is biologically appropriate and is exceptionally well suited to the 
study of sprouting angiogenesis in vivo [see review papers], which is the dominating form of angiogenesis in human tumors and non-tumor 
tissues, as discussed in invited review papers1,2. Angiogenesis induced in the membranous mesenteric parts by intraperitoneal (i.p.) injection of a pro-angiogenic factor can be modulated
by subcutaneous (s.c.), intravenous (i.v.) or oral (p.o.) treatment with modifying agents of choice. Each membranous part of the mesentery is 
translucent and framed by fatty tissue, giving it a window-like appearance.
The assay has the following advantageous features: (i) the test tissue is natively vascularized, albeit 
sparsely, and since it is extremely thin, the microvessel network is virtually two-dimensional, which allows the entire network 
to be assessed microscopically in situ; (ii) in adult rats the test tissue lacks significant physiologic angiogenesis, which characterizes
 most normal adult mammalian tissues; the degree of native vascularization is, however, correlated with age, as discussed in1; 
(iii) the negligible level of trauma-induced angiogenesis ensures high sensitivity; (iv) the 
assay replicates the clinical situation, as the angiogenesis-modulating test drugs are administered systemically and the responses 
observed reflect the net effect of all the metabolic, cellular, and molecular alterations induced by the treatment; (v) the assay 
allows assessments of objective, quantitative, unbiased variables of microvascular spatial extension, density, and network pattern 
formation, as well as of capillary sprouting, thereby enabling robust statistical analyses of the dose-effect and molecular 
structure-activity relationships; and (vi) the assay reveals with high sensitivity the toxic or harmful effects of treatments in 
terms of decreased rate of physiologic body-weight gain, as adult rats grow robustly.
Mast-cell-mediated angiogenesis was first demonstrated using this assay3,4. The model demonstrates a high level of 
discrimination regarding dosage-effect relationships and the measured effects of systemically administered chemically or functionally closely related drugs and proteins, 
including: (i) low-dosage, metronomically administered standard chemotherapeutics that yield diverse, drug-specific effects (i.e., 
angiogenesis-suppressive, neutral or angiogenesis-stimulating activities5); (ii) natural iron-unsaturated human lactoferrin, which stimulates 
VEGF-A-mediated angiogenesis6, and natural iron-unsaturated bovine lactoferrin, which inhibits VEGF-A-mediated angiogenesis7; and (iii) 
low-molecular-weight heparin fractions produced by various means8,9. Moreover, the assay is highly suited to studies of the combined 
effects on angiogenesis of agents that are administered systemically in a concurrent or sequential fashion.
The idea of making this video originated from the late Dr. Judah Folkman when he visited our laboratory and witnessed the methodology being demonstrated.
Review papers (invited) discussing and appraising the assay
Norrby, K. In vivo models of angiogenesis. J. Cell. Mol. Med. 10, 588-612 (2006).
Norrby, K. Drug testing with angiogenesis models. Expert Opin. Drug. Discov. 3, 533-549 (2008).

Normal adult vascularized mammalian tissue that lacks physiologic angiogenesis and that has not been exposed to surgical intervention is used to study: (i) the initiation and development of angiogenesis following intraperitoneal administration of test agents; and (ii) modification of angiogenesis following systemic administration of selected test agents.

The adult rat mesentery window angiogenesis assay is biologically appropriate and is exceptionally well suited to the 
study of sprouting angiogenesis in ...

The ex vivo Isolated Skeletal Microvessel Preparation for Investigation of Vascular Reactivity

The isolated microvessel preparation is an ex vivo preparation that allows for examination of the different contributions of factors that control vessel diameter, and thus, perfusion resistance1-5. This is a classic experimental preparation that was, in large measure, initially described by Uchida et al.15 several decades ago. This initial description provided the basis for the techniques that was extensively modified and enhanced, primarily in the laboratory of Dr. Brian Duling at the University of Virginia6-8, and we present a current approach in the following pages. This preparation will specifically refer to the gracilis arteriole in a rat as the microvessel of choice, but the basic preparation can readily be applied to vessels isolated from nearly any other tissue or organ across species9-13. Mechanical (i.e., dimensional) changes in the isolated microvessels can easily be evaluated in response to a broad array of physiological (e.g., hypoxia, intravascular pressure, or shear) or pharmacological challenges, and can provide insight into mechanistic elements comprising integrated responses in an intact, although ex vivo, tissue. The significance of this method is that it allows for facile manipulation of the influences on the integrated regulation of microvessel diameter, while also allowing for the control of many of the contributions from other sources, including intravascular pressure (myogenic), autonomic innervation, hemodynamic (e.g., shear stress), endothelial dependent or independent stimuli, hormonal, and parenchymal influences, to provide a partial list. Under appropriate experimental conditions and with appropriate goals, this can serve as an advantage over in vivo or in situ tissue/organ preparations, which do not readily allow for the facile control of broader systemic variables. 
The major limitation of this preparation is essentially the consequence of its strengths. By definition, the behavior of these vessels is being studied under conditions where many of the most significant contributors to the regulation of vascular resistance have been removed, including neural, humoral, metabolic, etc. As such, the investigator is cautioned to avoid over-interpretation and extrapolation of the data that are collected utilizing this preparation. The other significant area of concern with regard to this preparation is that it can be very easy to damage cellular components such as the endothelial lining or the vascular smooth muscle, such that variable source of error can be introduced. It is strongly recommended that the individual investigator utilize appropriate measurements to ensure the quality of the preparation, both at the initiation of the experiment and periodically throughout the course of a protocol.

The ex vivo Isolated Skeletal Microvessel Preparation for Investigation of Vascular Reactivity

An ex vivo preparation is described for isolation of the largest gracilis muscle resistance arterioles for interrogation of both vascular responses to vasoactive stimuli and the assessment of basic structural properties via passive wall mechanics.

The isolated  microvessel preparation is an ex vivo preparation that allows for examination of the different contributions of  factors that control vessel ...

Rat Mesentery Exteriorization: A Model for Investigating the Cellular Dynamics Involved in Angiogenesis

Microvacular network growth and remodeling are critical aspects of wound healing, inflammation, diabetic retinopathy, tumor growth and other disease conditions1, 2. Network growth is commonly attributed to angiogenesis, defined as the growth of new vessels from pre-existing vessels. The angiogenic process is also directly linked to arteriogenesis, defined as the capillary acquisition of a perivascular cell coating and vessel enlargement. Needless to say, angiogenesis is complex and involves multiple players at the cellular and molecular level3. Understanding how a microvascular network grows requires identifying the spatial and temporal dynamics along the hierarchy of a network over the time course of angiogenesis. This information is critical for the development of therapies aimed at manipulating vessel growth.
The exteriorization model described in this article represents a simple, reproducible model for stimulating angiogenesis in the rat mesentery. It was adapted from wound-healing models in the rat mesentery4-7, and is an alternative to stimulate angiogenesis in the mesentery via i.p. injections of pro-angiogenic agents8, 9. The exteriorization model is attractive because it requires minimal surgical intervention and produces dramatic, reproducible increases in capillary sprouts, vascular area and vascular density over a relatively short time course in a tissue that allows for the two-dimensional visualization of entire microvascular networks down to single cell level. The stimulated growth reflects natural angiogenic responses in a physiological environment without interference of foreign angiogenic molecules. Using immunohistochemical labeling methods, this model has been proven extremely useful in identifying novel cellular events involved in angiogenesis. Investigators can readily correlate the angiogenic metrics during the time course of remodeling with time specific dynamics, such as cellular phenotypic changes or cellular interactions4, 5, 7, 10, 11.

This article describes a simple model for stimulating angiogenesis in the rat mesentery. The model produces dramatic increases in capillary sprouting, vascular area and vascular density over a relatively short time course in a tissue that allows en face visualization of entire microvascular networks down to the single cell level.

Microvacular network growth and remodeling are critical aspects of wound healing, inflammation, diabetic retinopathy, tumor growth and other disease ...

Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA

The rate of translational elongation is non-uniform. mRNA secondary structure, codon usage and mRNA associated proteins may alter ribosome movement on the messagefor review see 1. However, it's now widely accepted that synonymous codon usage is the primary cause of non-uniform translational elongation rates1. Synonymous codons are not used with identical frequency. A bias exists in the use of synonymous codons with some codons used more frequently than others2. Codon bias is organism as well as tissue specific2,3. Moreover, frequency of codon usage is directly proportional to the concentrations of cognate tRNAs4. Thus, a frequently used codon will have higher multitude of corresponding tRNAs, which further implies that a frequent codon will be translated faster than an infrequent one. Thus, regions on mRNA enriched in rare codons (potential pause sites) will as a rule slow down ribosome movement on the message and cause accumulation of nascent peptides of the respective sizes5-8. These pause sites can have functional impact on the protein expression, mRNA stability and protein foldingfor review see 9. Indeed, it was shown that alleviation of such pause sites can alter ribosome movement on mRNA and subsequently may affect the efficiency of co-translational (in vivo) protein folding1,7,10,11. To understand the process of protein folding in vivo, in the cell, that is ultimately coupled to the process of protein synthesis it is essential to gain comprehensive insights into the impact of codon usage/tRNA content on the movement of ribosomes along mRNA during translational elongation.
Here we describe a simple technique that can be used to locate major translation pause sites for a given mRNA translated in various cell-free systems6-8. This procedure is based on isolation of nascent polypeptides accumulating on ribosomes during in vitro translation of a target mRNA. The rationale is that at low-frequency codons, the increase in the residence time of the ribosomes results in increased amounts of nascent peptides of the corresponding sizes. In vitro transcribed mRNA is used for in vitro translational reactions in the presence of radioactively labeled amino acids to allow the detection of the nascent chains. In order to isolate ribosome bound nascent polypeptide complexes the translation reaction is layered on top of 30% glycerol solution followed by centrifugation. Nascent polypeptides in polysomal pellet are further treated with ribonuclease A and resolved by SDS PAGE. This technique can be potentially used for any protein and allows analysis of ribosome movement along mRNA and the detection of the major pause sites. Additionally, this protocol can be adapted to study factors and conditions that can alter ribosome movement and thus potentially can also alter the function/conformation of the protein.

Isolation of Ribosome Bound Nascent Polypeptides in vitro to Identify Translational Pause Sites Along mRNA

A technique to identify translational pause sites on mRNA is described. This procedure is based on isolation of nascent polypeptides accumulating on ribosomes during in vitro translation of a target mRNA, followed by the size analysis of the nascent chains using a denaturing gel electrophoresis.

The rate of translational elongation is non-uniform. mRNA secondary structure, codon usage and mRNA associated proteins may alter ribosome movement on the ...

Using SecM Arrest Sequence as a Tool to Isolate Ribosome Bound Polypeptides

Extensive research has provided ample evidences suggesting that protein folding in the cell is a co-translational process1-5. However, the exact pathway that polypeptide chain follows during co-translational folding to achieve its functional form is still an enigma. In order to understand this process and to determine the exact conformation of the co-translational folding intermediates, it is essential to develop techniques that allow the isolation of RNCs carrying nascent chains of predetermined sizes to allow their further structural analysis.
SecM (secretion monitor) is a 170 amino acid E. coli protein that regulates expression of the downstream SecA (secretion driving) ATPase in the secM-secA operon6. Nakatogawa and Ito originally found that a 17 amino acid long sequence (150-FSTPVWISQAQGIRAGP-166) in the C-terminal region of the SecM protein is sufficient and necessary to cause stalling of SecM elongation at Gly165, thereby producing peptidyl-glycyl-tRNA stably bound to the ribosomal P-site7-9. More importantly, it was found that this 17 amino acid long sequence can be fused to the C-terminus of virtually any full-length and/or truncated protein thus allowing the production of RNCs carrying nascent chains of predetermined sizes7. Thus, when fused or inserted into the target protein, SecM stalling sequence produces arrest of the polypeptide chain elongation and generates stable RNCs both in vivo in E. coli cells and in vitro in a cell-free system. Sucrose gradient centrifugation is further utilized to isolate RNCs.
The isolated RNCs can be used to analyze structural and functional features of the co-translational folding intermediates. Recently, this technique has been successfully used to gain insights into the structure of several ribosome bound nascent chains10,11. Here we describe the isolation of bovine Gamma-B Crystallin RNCs fused to SecM and generated in an in vitro translation system.

We describe here a technique that is now routinely used to isolate stably bound ribosome nascent chain complexes (RNCs). This technique takes advantage of the discovery that a 17 amino acid long SecM "arrest sequence" can halt translation elongation in a prokaryotic (E. coli) system, when inserted into (or fused to the C-terminus) of virtually any protein.

Extensive research has provided ample evidences suggesting that protein folding in the cell is a co-translational process1-5. However, the exact pathway ...

Quantifying Single Microvessel Permeability in Isolated Blood-perfused Rat Lung Preparation

The isolated blood-perfused lung preparation is widely used to visualize and define signaling in single microvessels. By coupling this preparation with real time imaging, it becomes feasible to determine permeability changes in individual pulmonary microvessels. Herein we describe steps to isolate rat lungs and perfuse them with autologous blood. Then, we outline steps to infuse fluorophores or agents via a microcatheter into a small lung region. Using these procedures described, we determined permeability increases in rat lung microvessels in response to infusions of bacterial lipopolysaccharide. The data revealed that lipopolysaccharide increased fluid leak across both venular and capillary microvessel segments. Thus, this method makes it possible to compare permeability responses among vascular segments and thus, define any heterogeneity in the response. While commonly used methods to define lung permeability require postprocessing of lung tissue samples, the use of real time imaging obviates this requirement as evident from the present method. Thus, the isolated lung preparation combined with real time imaging offers several advantages over traditional methods to determine lung microvascular permeability, yet is a straightforward method to develop and implement.

The isolated blood-perfused lung preparation makes it feasible to visualize microvessel networks on the lung surface. Here we describe an approach to quantify permeability of single microvessels in isolated lungs using real time fluorescence imaging.

The isolated blood-perfused lung preparation is widely used to visualize and define signaling in single microvessels. By coupling this preparation with ...

Measuring the Osmotic Water Permeability Coefficient (Pf) of Spherical Cells: Isolated Plant Protoplasts as an Example

Studying AQP regulation mechanisms is crucial for the understanding of water relations at both the cellular and the whole plant levels. Presented here is a simple and very efficient method for the determination of the osmotic water permeability coefficient (Pf) in plant protoplasts, applicable in principle also to other spherical cells such as frog oocytes. The first step of the assay is the isolation of protoplasts from the plant tissue of interest by enzymatic digestion into a chamber with an appropriate isotonic solution. The second step consists of an osmotic challenge assay: protoplasts immobilized on the bottom of the chamber are submitted to a constant perfusion starting with an isotonic solution and followed by a hypotonic solution. The cell swelling is video recorded. In the third step, the images are processed offline to yield volume changes, and the time course of the volume changes is correlated with the time course of the change in osmolarity of the chamber perfusion medium, using a curve fitting procedure written in Matlab (the &#8216;PfFit&#8217;), to yield Pf.

Measuring the Osmotic Water Permeability Coefficient Pf of Spherical Cells: Isolated Plant Protoplasts as an Example

Measuring the osmotic water permeability coefficient (Pf) of cells can help understand the regulatory mechanisms of aquaporins (AQPs). Pf determination in spherical plant cell protoplasts presented here involves protoplasts isolation and numerical analysis of their initial rate of volume change as a result of an osmotic challenge during constant bath perfusion.

Studying AQP regulation mechanisms is crucial for the understanding of water relations at both the cellular and the whole plant levels. Presented here is ...

In Vitro and In Vivo Approaches to Determine Intestinal Epithelial Cell Permeability

The intestinal barrier defends against pathogenic microorganism and microbial toxin. Its function is regulated by tight junction permeability and epithelial cell integrity, and disruption of the intestinal barrier function contributes to progression of gastrointestinal and systemic disease. Two simple methods are described here to measure the permeability of intestinal epithelium. In vitro, Caco-2BBe cells are plated in tissue culture wells as a monolayer and transepithelial electrical resistance (TER) can be measured by an epithelial (volt/ohm) meter. This method is convincing because of its user-friendly operation and repeatability. In vivo, mice are gavaged with 4 kDa fluorescein isothiocyanate (FITC)-dextran, and the FITC-dextran concentrations are measured in collected serum samples from mice to determine the epithelial permeability. Oral gavage provides an accurate dose, and therefore is the preferred method to measure the intestinal permeability in vivo. Taken together, these two methods can measure the permeability of the intestinal epithelium in vitro and in vivo, and hence be used to study the connection between diseases and barrier function.

In Vitro and In Vivo Approaches to Determine Intestinal Epithelial Cell Permeability

Two methods are presented here to determine intestinal barrier function. An epithelial meter (volt/ohm) is used for measurements of transepithelial electrical resistance of cultured epithelia directly in tissue culture wells. In mice, the FITC-dextran gavage method is used to determine the intestinal permeability in vivo.